Phylogenetic tree toolkit (ETE). Tree manipulation (Newick/NHX), evolutionary event detection, orthology/paralogy, NCBI taxonomy, visualization (PDF/SVG), for phylogenomics.
WHAT YOU BECOME
Perfect for these scenarios
Test and refine documentation for seamless new employee training.
Iterate on processes until they’re error-proof and easy to follow.
Validate launch steps with subagents before rollout.
Refine workflows through iterative testing and feedback loops.
MEASURED GAIN
Proven benefits and measurable impact
Cut doc creation time by testing drafts before writing.
Eliminate mistakes by validating processes with subagents.
Accelerate team adoption with clear, tested procedures.
WHAT YOU GET
Files, tags and the three-step install
Tip: Read the documentation and the code before first use, so you know what it does and which permissions it needs.
NEXT SCRIPTS
Recommended based on tags and category
Generate and maintain AGENTS.md files following the public agents.md convention. Use when creating documentation for AI agent workflows, onboarding guides, or when standardizing agent interaction patterns across projects.
Access AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.
Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.